A listing of research and refereed publications as a result of faculty research in the Department of Agricultural and Biological Engineering at Penn State.

Manuresheds: Tools to recycle nutrients for the sustainable intensification of agriculture
Agricultural Systems, Spiegal, Sheri, Kleinman, Peter, Endale, Dinku, Bryan, Ray, Goslee, Sarah, Meinen, Robert, Flynn, Colton, Baker, John, Browning, Dawn, McCarty, Greg, Bittman, Shabtai, Carter, Jennifer, Cavigelli, Michel, Duncan, Emily, Gowda, Prasanna, Li, Xia, Ponce-Campos, uillermo, Cibin, Raj, Silveira, Maria, Smith, Doulas, Arthur, Dan, Yang, Qichun, 2020

Influence of hydrologic and anthropogenic drivers on emerging organic contaminants in drinking water sources in the Susquehanna River Basin
Chemosphere, Kibuye, Faith A., Gall, Heather E., Veith, Tamie L., Elkin, Kyle R., Elliott, Herschel A., Harper, Jeremy P., Watson, John E., 2020

Determination of key canopy parameters for mass mechanical apple harvesting using supervised machine learning and principal component analysis (PCA)
Biosystems Engineering, Zhang, Xin, He, Long, Zhang, Jing, Whiting, Matthew, Karkee, Manoj, Zhang, Qin, 2020

HYDRUS-2D simulations of carbamazepine transport in wastewater-irrigated soil under different land uses
Journal of Environmental Quality, Filipović, L, Filipović, V, Walker, C, Williams, C, Preisendanz, H, Watson, John, 2020

Semantic segmentation of sparse 3D point cloud based on geometrical features for trellis-structured apple orchard
Biosystems Engineering, Zeng, Lihua, Feng, Juan, He, Long, 2020

Development of a Robotic End-Effector for Apple Tree Pruning
Transactions of the ASABE, Zahid, Azlan, He, Long, Zeng, Lihua, Choi, Daeun, Schupp, James, Heinemann, Paul, 2020

Bruise Patterns of Fresh Market Apples Caused by Fruit-to-Fruit Impact
Agronomy, Fu, Han, Karkee, Manoj, He, Long, Duan, Jieli, Li, Jun, Zhang, Qin, 2020

Recycling hot-water extractions of lignocellulosic biomass in bio-refinery for synthesis of carbon nanoparticles with amplified luminescence and its application in temperature sensing
Industrial Crops and Products, Zhang, L, Lyu, S, Zhang, Q., Chmely, Stephen, Wu, Y, Melcher, C, Rajan, K, Harper, D, Wang, S, Chen, Z, 2020

The formation of Gluconacetobacter xylinum cellulose under the influence of the dye brilliant yellow
Cellulose, Weng, Yuanyuan, Nagle, Brittney, Mueller, Karl, Catchmark, Jeffrey, 2019

Biomass for Energy Supply Chains: A Review
Renewable and Sustainable Energy Reveiws, Nunes, Leonel, Causer, Thomas, Ciolkosz, Daniel, 2019

A statistical optimization study on dilute sulfuric acid pretreatment of distillers dried grains with solubles (DDGS) as a potential feedstock for fermentation applications
Waste and Biomass Valorization, Cekmecelioglu, Deniz, Demirci, Ali, 2019

A Statistical Optimization Study on Dilute Sulfuric Acid Pretreatment of Distillers Dried Grains with Solubles (DDGS) As a Potential Feedstock for Fermentation Applications
Waste and Biomass Valorization, Cekmecelioglu, Deniz, Demirci, Ali, 2019

Controlling Heterogeneity and Increasing Titer from Riboswitch-Regulated Bacillus subtilis Spores for Time-Delayed Protein Expression Applications
ACS Synthetic Biology, Tamiev, Denis, Lantz, Alyssa, Vezeau, Grace, Salis, Howard, Reuel, Nigel F., 2019

Bacterial cellulose/hyaluronic acid nanocomposites production through co-culturing Gluconacetobacter hansenii and Lactococcus lactis in a two-vessel circulating system
Bioresource technology, Liu, Ke, Catchmark, Jeffrey M., 2019

Anaerobic bioprocessing of wastewater-derived duckweed
Bioresource technology, Calicioglu, O., Richard, Thomas Lehman, Brennan, Rachel Alice, 2019

MicroCT imaging to determine coordination number and contact area of biomass particles in densified assemblies
Powder Technology, Karamchandani, Apoorva, Yi, Hojae, Puri, Virendra, 2019

Enhanced mechanical properties of bacterial cellulose nanocomposites produced by co-culturing Gluconacetobacter hansenii and Escherichia coli under static conditions
Carbohydrate Polymers, Liu, Ke, Catchmark, Jeffrey M., 2019

Seasonal hydroclimatic ensemble forecasts anticipate nutrient and suspended sediment loads using a dynamical-statistical approach
Environmental Research Letters, Sharma, Sanjib, Gall, Heather, Gironás, Jorge, Mejia, Alfonso, 2019

Optimization of dilute sulfuric acid, aqueous ammonia, and steam explosion as the pretreatments steps for distillers’ dried grains with solubles as a potential fermentation feedstock
Bioresource technology, Iram, Attia, Cekmecelioglu, Deniz, Demirci, Ali, 2019

Corn stover harvest N and energy budgets in central Iowa
Science of the Total Environment, Malone, R. W., Herbstritt, S., Ma, L., Richard, Thomas Lehman, Cibin Raj, Fnu, Gassman, P. W., Zhang, H. H., Karlen, D. L., Hatfield, J. L., Obrycki, J. F., Helmers, M. J., Jaynes, D. B., Kaspar, T. C., Parkin, T. B., Fang, Q. X., 2019

Synergistic pectin degradation and guard cell pressurization underlie stomatal pore formation
Plant physiology, Rui, Yue, Chen, Yintong, Yi, Hojae, Purzycki, Taylor, Puri, Virendra M., Anderson, Charles T., 2019

Kinetic modeling and techno-economic feasibility of ethanol production from carob extract based medium in biofilm reactor
Applied Sciences (Switzerland), Germec, Mustafa, Turhan, Irfan, Karhan, Mustafa, Demirci, Ali, 2019

Vapor-Phase Stabilization of Biomass Pyrolysis Vapors Using Mixed-Metal Oxide Catalysts
ACS Sustainable Chemistry and Engineering, Edmunds, Charles W., Mukarakate, Calvin, Xu, Mengze, Regmi, Yagya N., Hamilton, Choo, Schaidle, Joshua A., Labbé, Nicole, Chmely, Stephen, 2019

Hydrologic responses to projected climate change in ecologically diverse watersheds of the Gulf Coast, United States
International Journal of Climatology, Neupane, Ram P., Ficklin, Darren L., Knouft, Jason H., Ehsani, Nima, Cibin Raj, Fnu, 2019

Fate of pharmaceuticals in a spray-irrigation system: From wastewater to groundwater
Science of the Total Environment, Kibuye, Faith A., Gall, Heather Elise, Elkin, Kyle R., Ayers, Brittany, Veith, Tamie L., Miller, Megan, Jacob, Shannon, Hayden, Kathryn R., Watson, John Earl, Elliott, Herschel Adams, 2019

Dual-emitting film with cellulose nanocrystal-assisted carbon dots grafted SrAl 2 O 4 , Eu 2+ , Dy 3+ phosphors for temperature sensing
Carbohydrate Polymers, Zhang, Longfei, Lyu, Shaoyi, Zhang, Qijun, Wu, Yuntao, Melcher, Chuck, Chmely, Stephen, Chen, Zhilin, Wang, Siqun, 2019

Load-discharge relationships reveal the efficacy of manure application practices on phosphorus and total solids losses from agricultural fields
Agriculture, Ecosystems and Environment, Miller, Melissa D., Gall, Heather E., Buda, Anthony R., Saporito, Lou S., Veith, Tamie L., White, Charles M., Williams, Clinton F., Brasier, Kathryn J., Kleinman, Peter J.A., Watson, John E., 2019

Effects of medium components in a glycerol-based medium on vitamin K (menaquinone-7) production by Bacillus subtilis natto in biofilm reactors
Bioprocess and biosystems engineering, Mahdinia, Ehsan, Demirci, Ali, Berenjian, Aydin, 2019

Personal waste management in higher education
International Journal of Sustainability in Higher Education, Michael, Judd Harrison, Elser, Nathaniel, 2019

Apple fruit recognition algorithm based on multi-spectral dynamic image analysis
Sensors (Switzerland), Feng, Juan, Zeng, Lihua, He, Long, 2019

Prediction of human assessments of dairy odor utilizing a fast gas chromatograph and neural networks
Computers and Electronics in Agriculture, Chang, Fangle, Heinemann, Paul Heinz, 2019

Micromechanical characterization of particle-particle bond in biomass assemblies formed at different applied pressure and temperature
KONA Powder and Particle Journal, Karamchandani, Apoorva, Yi, Hojae, Puri, Virendra, 2019

The stomatal flexoskeleton: how the biomechanics of guard cell walls animate an elastic pressure vessel
JOURNAL OF EXPERIMENTAL BOTANY, Yi, Hojae, Chen, Yintong, Wang, James, Puri, Virendra, Anderson, Charles, 2019

Occurrence, concentrations, and risks of pharmaceutical compounds in private wells in central Pennsylvania
Journal of Environmental Quality, Kibuye, Faith A., Gall, Heather E., Elkin, Kyle R., Swistock, Bryan, Veith, Tamie L., Watson, John E., Elliott, Herschel A., 2019

Raw, torrefied, and alkaline-treated biomass as a sorbent for lead in water
BioResources, Ciolkosz, Daniel, Desplat, Jennifer, Schiffer, Katelyn, 2019

Dimensional reduction and ionic gating induced enhancement of superconductivity in atomically thin crystals of 2H-TaSe 2
Nanotechnology, Wu, Y., He, J., Liu, J., Xing, H., Mao, Z., Liu, Y., 2019

Distinct Signatures of Electron-Phonon Coupling Observed in the Lattice Thermal Conductivity of NbSe 3 Nanowires
Nano letters, Yang, L., Tao, Y., Liu, J., Liu, C., Zhang, Q., Akter, M., Zhao, Y., Xu, T.T., Xu, Y., Mao, Z., Chen, Y., Li, D., 2019

Mechanochemically directed metathesis in group 2 chemistry
Chemical Communications, Speight, Isaiah R., Chmely, Stephen, Hanusa, Timothy P., Rheingold, Arnold L., 2019

Effects of ensiling time on corn silage neutral detergent fiber degradability and relationship between laboratory fiber analyses and in vivo digestibility
Journal of dairy science, Hristov, A. N., Harper, M. T., Roth, G., Canale, C., Huhtanen, P., Richard, T. L., DiMarco, K., 2019

Effect of shaking location and duration on mechanical harvesting of fresh market apples
Applied Engineering in Agriculture, He, Long, Zhang, Xin, Ye, Yunxiang, Karkee, Manoj, Zhang, Qin, 2019

Application of mathematical models to ethanol fermentation in biofilm reactor with carob extract
Biomass Conversion and Biorefinery, Germec, Mustafa, Cheng, Kuan Chen, Karhan, Mustafa, Demirci, Ali, Turhan, Irfan, 2019

RNA size and 3-dimensional structure determine ultrafiltration behavior of small RNA molecules
Separation and Purification Technology, Manzano, Ivan, Vezeau, Grace, Salis, Howard, Zydney, Andrew, 2019

Techno-economic bottlenecks of fungal pretreatment of lignocellulosic biomass
Fermentation, Vasco-Correa, Juliana, Shah, A, 2019

Comparative study of changes in composition and structure during sequential fungal pretreatment of non-sterile lignocellulosic feedstocks
Industrial Crops and Products, Vasco-Correa, Juliana, Luo, X, Li, Y, Shah, A, 2019

Inactivation of Staphylococcus aureus and Escherichia coli O157:H7 on fresh kashar cheese with pulsed ultraviolet light
Food Science and Technology International, Keklik, Nene M., Elik, Adil, Salgin, Uğur, Demirci, Ali, Koçer, Gamze, 2019

Enhanced vitamin K (Menaquinone-7) production by Bacillus subtilis natto in biofilm reactors by optimization of glucose-based medium
Current Pharmaceutical Biotechnology, Mahdinia, Ehsan, Demirci, Ali, Berenjian, Aydin, 2019

Modeling of vitamin K (Menaquinoe-7) fermentation by Bacillus subtilis natto in biofilm reactors
Biocatalysis and Agricultural Biotechnology, Mahdinia, Ehsan, Mamouri, Sina Jahangiri, Puri, Virendra, Demirci, Ali, Berenjian, Aydin, 2019

Evaluation of the effect of climate and land use changes on hydrologic processes in the Salt River Basin, Missouri, United States
JAWRA, Phung, Quang, Thompson, Allen, Bauffat, Claire, Costello, Christine, Sadler, John, Lupo, Anthony, Svoma, B, Gautam, Sagar, 2019

A strategic orientation toward entrepreneurship
Forest Products Journal, Elser, Nathaniel C., Michael, Judd Harrison, 2019

Separation of BTX chemicals from biomass pyrolysis oils via continuous flash distillation
Biomass Conversion and Biorefinery, McVey, Matthew, Elkasabi, Yaseen, Ciolkosz, Daniel Edward, 2019

Inactivation of Escherichia coli and Salmonella in liquid egg white by pulsed UV light and its effects on quality
Journal of Food Process Engineering, Ouyang, Beining, Demirci, Ali, Patterson, Paul H., 2019

Insight into molecular-level interactions between imidazolium-based ionic liquids and cellulose combining NMR, SAXS and MD simulations
Acta Crystallography, Annamraju, A, Smith, N, Petridis, L, O'Neill, H, Pingali, S, Chmely, Stephen, Labbé, N, 2019

Ensiled wet storage accelerates pretreatment for bioconversion of corn stover
Frontiers in Bioengineering and Biotechnology, Essien, Dzidzor, Richard, Tom L., 2018

The pyrolytic evolution of morphology in biobased coke replacement briquettes: Links between morphology, nanowire characteristics, and performance in cupolas
Carbon, Peña, L., Mitchell, G., Cannon, Fred Scott, Komarneni, Sridhar, Brown, Nicole, 2018

A Canonical Biophysical Model of the CsrA Global Regulator Suggests Flexible Regulator-Target Interactions
Scientific reports, Leistra, A. N., Gelderman, G., Sowa, S. W., Moon-Walker, A., Salis, Howard M., Contreras, L. M., 2018

Detection and counting of immature green citrus fruit based on the Local Binary Patterns (LBP) feature using illumination-normalized images
Precision Agriculture, Wang, Chenglin, Lee, Won Suk, Zou, Xiangjun, Choi, Daeun, Gan, Hao, Diamond, Justice, 2018

Branch detection for apple trees trained in fruiting wall architecture using depth features and Regions-Convolutional Neural Network (R-CNN)
Computers and Electronics in Agriculture, Zhang, Jing, He, Long, Karkee, Manoj, Zhang, Qin, Zhang, Xin, Gao, Zongmei, 2018

Ethanol production in a biofilm reactor with non-sterile carob extract media and its modeling
Energy Sources, Part A: Recovery, Utilization and Environmental Effects, Germec, Mustafa, Karhan, Mustafa, Demirci, Ali, Turhan, Irfan, 2018

Wet corn stover storage
Frontiers in Energy Research, Essien, Dzidzor, Marshall, Megan N., Richard, Tom L., Ray, Allison, 2018

Implementation of fed-batch strategies for vitamin K (menaquinone-7) production by Bacillus subtilis natto in biofilm reactors
Applied Microbiology and Biotechnology, Mahdinia, Ehsan, Demirci, Ali, Berenjian, Aydin, 2018

Effects of combined pretreatment with rod-milled and torrefaction on physicochemical and fuel characteristics of wheat straw
Bioresource technology, Bai, Xiaopeng, Wang, Guanghui, Sun, Yue, Yu, Yan, Liu, Jude, Wang, Decheng, Wang, Zhiqin, 2018

Lignin-Containing Photoactive Resins for 3D Printing by Stereolithography
ACS Applied Materials and Interfaces, Sutton, Jordan T., Rajan, Kalavathy, Harper, David P., Chmely, Stephen C., 2018

Combined different dehydration pretreatments and torrefaction to upgrade fuel properties of hybrid pennisetum (Pennisetum americanum ×P. purpureum)
Bioresource technology, Yu, Yan, Wang, Guanghui, Bai, Xiaopeng, Liu, Jude, Wang, Decheng, Wang, Zhiqin, 2018

Effects of roll and flail conditioning systems on mowing and baling of Miscanthus × giganteus feedstock
Biosystems Engineering, Redcay, Sebastian, Koirala, Anil, Liu, Jude, 2018

Evaluation of non-thermal hurdle technology for ultraviolet-light to inactivate Escherichia coli K12 on goat meat surfaces
Food Control, Degala, Hema L., Mahapatra, Ajit K., Demirci, Ali, Kannan, Govind, 2018

Sustainable Hydrogels Based on Lignin-Methacrylate Copolymers with Enhanced Water Retention and Tunable Material Properties
Biomacromolecules, Rajan, Kalavathy, Mann, Jeffrey K., English, Eldon, Harper, David P., Carrier, Danielle Julie, Rials, Timothy G., Labbé, Nicole, Chmely, Stephen C., 2018

Bridging biofuel sustainability indicators and ecosystem services through stakeholder engagement
Biomass and Bioenergy, Dale, Virginia H., Kline, Keith L., Richard, Tom L., Karlen, Douglas L., Belden, William W., 2018

Optimizing prediction of human assessments of dairy odors using input variable selection
Computers and Electronics in Agriculture, Chang, Fangle, Heinemann, Paul Heinz, 2018

Improved eco-friendly barrier materials based on crystalline nanocellulose/chitosan/carboxymethyl cellulose polyelectrolyte complexes
Food Hydrocolloids, Chi, Kai, Catchmark, Jeffrey M., 2018

Perennial biomass production from marginal land in the Upper Mississippi River Basin
Land Degradation and Development, Feng, Qingyu, Chaubey, Indrajeet, Cibin Raj, Fnu, Engel, Bernard, Sudheer, K. P., Volenec, Jeffrey, Omani, Nina, 2018

Greenhouse Gas Emissions from Agriculture
Journal of Agricultural and Environmental Ethics, Chiles, Robert Magneson, Fabian, Eileen, Tobin, Daniel, Colby, Scott J., DePue, S. Molly, 2018

Parameter estimation of SWAT and quantification of consequent confidence bands of model simulations
Environmental Earth Sciences, Krishnan, Nithya, Cibin Raj, Fnu, Chaubey, I., Sudheer, K. P., 2018

Correction to
Precision Agriculture, Wang, Chenglin, Lee, Won Suk, Zou, Xiangjun, Choi, Daeun, Gan, Hao, Diamond, Justice, 2018

Hot water extraction as a pretreatment for reducing syngas inorganics impurities – A parametric investigation on switchgrass and loblolly pine bark
Fuel, Liu, Qiaoming, Labbé, Nicole, Adhikari, Sushil, Chmely, Stephen C., Abdoulmoumine, Nourredine, 2018

Enhancing carboxylic acid yields from duckweed by acidogenic digestion
European Biomass Conference and Exhibition Proceedings, Calicioglu, Ozgul, Shreve, M. J., Urban, Nicole L., Richard, Thomas Lehman, Brennan, Rachel Alice, 2018

Energy use and greenhouse gas emissions in organic and conventional grain crop production
Agricultural Systems, Hoffman, Eric, Cavigelli, Michel A., Camargo, Gustavo, Ryan, Matthew, Ackroyd, Victoria J., Richard, Tom L., Mirsky, Steven, 2018

Orchard manoeuvring strategy for a robotic bin-handling machine
Biosystems Engineering, Ye, Yunxiang, He, Long, Wang, Zhaodong, Jones, Dylan, Hollinger, Geoffrey A., Taylor, Matthew E., Zhang, Qin, 2018

Spatial optimization of cropping pattern for sustainable food and biofuel production with minimal downstream pollution
Journal of Environmental Management, Femeena, P. V., Sudheer, K. P., Cibin Raj, Fnu, Chaubey, I., 2018

Estrogen occurrence and persistence in vernal pools impacted by wastewater irrigation practices
Agriculture, Ecosystems and Environment, Mina, Odette, Gall, Heather E., Elliott, Herschel A., Watson, John E., Mashtare, Michael L., Langkilde, Tracy, Harper, Jeremy P., Boyer, Elizabeth W., 2018

Effects of exopolysaccharides from Escherichia coli ATCC 35860 on the mechanical properties of bacterial cellulose nanocomposites
Cellulose, Liu, Ke, Catchmark, Jeffrey M., 2018

Mathematical modeling of lactic acid fermentation in bioreactor with carob extract
Biocatalysis and Agricultural Biotechnology, Germec, Mustafa, Karhan, Mustafa, Bialka, Katherine L., Demirci, Ali, Turhan, Irfan, 2018

Relationship between total dissolved solids and electrical conductivity in Marcellus hydraulic fracturing fluids
Water Science and Technology, Taylor, Malcolm, Elliott, Herschel A., Navitsky, Laura O., 2018

Catalytic transfer hydrogenolysis of organosolv lignin using B-containing FeNi alloyed catalysts
Catalysis Today, Regmi, Yagya N., Mann, Jeffrey K., McBride, James R., Tao, Jingming, Barnes, Craig E., Labbé, Nicole, Chmely, Stephen, 2018

Evaluation of bioenergy crop growth and the impacts of bioenergy crops on streamflow, tile drain flow and nutrient losses in an extensively tile-drained watershed using SWAT
Science of the Total Environment, Guo, Tian, Cibin Raj, Fnu, Chaubey, Indrajeet, Gitau, Margaret, Arnold, Jeffrey G., Srinivasan, Raghavan, Kiniry, James R., Engel, Bernard A., 2018

Critical review on engineering mechanical quality of green compacts using powder properties
KONA Powder and Particle Journal, Yi, Hojae, Pandeya, Anuranjan, Karamchandani, Apoorva, Puri, Virendra, 2018

Mechanical Effects of Cellulose, Xyloglucan, and Pectins on Stomatal Guard Cells of Arabidopsis thaliana
Frontiers in Plant Science, Yi, Hojae, Rui, Yue, Kandemir, Baris, Wang, James, Anderson, Charles, Puri, Virendra, 2018

Field Evaluation of Data-based Pruning Severity Levels (PSL) on Mechanical Harvesting of Apples
IFAC-PapersOnLine, Zhang, Xin, Fu, Longsheng, Majeed, Yaqoob, He, Long, Karkee, Manoj, Whiting, Matthew D., Zhang, Qin, 2018

Sensing and automation in pruning of apple trees: a review
Agronomy, 2018

Improved filter strip representation in SWAT model to simulate energy crop filter strips
Transactions of the ASABE, Cibin, Raj, Chaubey, Indrajeet, Sudheer, K P, White, MJ, Arnold, J G, Helmers, Matthew, 2018

Anaerobic digestion for bioenergy production: Global status, environmental and techno-economic implications, and government policies
Bioresource Technology, Vasco-Correa, Juliana, Khanal, S, Manadhar, A, Shah, A, 2018

Using coherent phonons for ultrafast control of the Dirac node of SrMnSb2
Physical Review B, Weber, C.P., Masten, M.G., Ogloza, T.C., Berggren, B.S., Man, M.K.L., Dani, K.M., Liu, J., Mao, Z., Klug, D.D., Adeleke, A.A., Yao, Y., 2018

Relationship between lignocellulosic biomass dissolution and physicochemical properties of ionic liquids composed of 3-methylimidazolium cations and carboxylate anions
Physical Chemistry Chemical Physics, Moyer, Preenaa, Smith, Micholas Dean, Abdoulmoumine, Nourredine, Chmely, Stephen C., Smith, Jeremy C., Petridis, Loukas, Labbé, Nicole, 2018

Assessing Long-term Hydrologic Impact of Climate Change Using an Ensemble Approach and Comparison with Global Gridded Models – A Case Study on Goodwater Creek Experimental Watershed
Water, Gautam, Sagar, Costello, Christine, Baffaut, Claire, Thompson, Allen, Svoma, B., Phung, Quang, Sadler, John, 2018

A Comprehensive Life Cycle Assessment of Greenhouse Gas Emissions from U.S. Household Food Choices
Food Policy, Boehm, Rebecca, Wilde, Parke, Ver Ploeg, Michele, Costello, Christine, Cash, Sean, 2018

Iron oxide to mitigate hydrogen sulfide gas release from gypsum-bedded dairy manure storages
Transactions of the ASABE, Chen, L., Hile, M. L., Fabian, Eileen, Xu, Z., Bruns, Maryann Victoria, Brown, V., 2018

Evaluation of a Leveling System for a Weeding Robot under Field Condition
IFAC-PapersOnLine, Chen, Lin, Karkee, Manoj, He, Long, Wei, Yunlong, Zhang, Qin, 2018

Utilization of glucose-based medium and optimization of Bacillus subtilis natto growth parameters for vitamin K (menaquinone-7) production in biofilm reactors
Biocatalysis and Agricultural Biotechnology, Mahdinia, Ehsan, Demirci, Ali, Berenjian, Aydin, 2018

An improved representation of vegetative filter strips in swat
Transactions of the ASABE, Cibin, R., Chaubey, I., Helmers, M., Sudheer, K. P., White, M. J., Arnold, J. G., 2018

The maize corngrass1 miRNA-regulated developmental alterations are restored by a bacterial ADP-glucosepyro phosphorylase in transgenic tobacco
International Journal of Genomics, Ligaba-Osena, Ayalew, DiMarco, Kay, Richard, Tom L., Hankoua, Bertrand, 2018

Angle-dependent magnetoresistance as a sensitive probe of the charge density wave in quasi-one-dimensional semimetal Ta 2 NiSe 7
Applied Physics Letters, He, J., Wen, L., Wu, Y., Liu, J., Tang, G., Yang, Y., Xing, H., Mao, Z., Sun, H., Liu, Y., 2018

Evaluation of dry steam preconditioning on switchgrass pellet quality metrics
Applied Engineering in Agriculture, Covelli, C. R., Yi, Hojae, Karamchandani, A., Ciolkosz, Daniel Edward, Puri, Virendra, 2018

Agri-food firms, universities, and corporate social responsibility
Renewable Agriculture and Food Systems, Chiles, Robert Magneson, Glenna, Leland Luther, Sharma, Amit, Catchmark, Jeffrey M., Azzara, Carl Daniel, Maretzki, Audrey, 2018

Gypsum bedding impact on hydrogen sulfide release from dairy manure storages
Transactions of the ASABE, Hile, M. L., Fabian-Wheeler, E., Murphy, D. J., Meinen, R. J., Hill, D. A., Elliott, H. A., Bryant, R. B., 2018

Quantifying fruit quality affected by mechanical impact for selected apple varieties
IFAC-PapersOnLine, Fu, Han, Duan, Jieli, Karkee, Manoj, He, Long, Chen, Du, Sun, Daozong, Zhang, Qin, 2018

Prediction of human responses to dairy odor using an electronic nose and neural networks
Transactions of the ASABE, Chang, F., Heinemann, P. H., 2018

Structural changes in lignocellulosic biomass during activation with ionic liquids comprising 3-methylimidazolium cations and carboxylate anions
Biotechnology for Biofuels, Moyer, P, Kim, K, Abdoulmoumine, N, Chmely, Stephen, Long, B, Carrier, D, Labbé, N, 2018

Balancing strength and flexibility: how the synthesis, organization, and modification of guard cell walls govern stomatal development and dynamics
Frontiers in Plant Science, Rui, Yue, Chen, Yintong, Kandemir, Baris, Yi, Hojae, Wang, James, Puri, Virendra, Anderson, Charles, 2018

Influence of Bioenergy Crop Production and Climate Change on Ecosystem Services
Journal of the American Water Resources Association, Cibin Raj, Fnu, Chaubey, Indrajeet, Muenich, Rebecca L., Cherkauer, Keith A., Gassman, Philip W., Kling, Catherine L., Panagopoulos, Yiannis, 2017

Policy Implications from Multi-scale Watershed Models of Biofuel Crop Adoption across the Corn Belt
Journal of the American Water Resources Association, Kling, Catherine L., Chaubey, Indrajeet, Cibin Raj, Fnu, Gassman, Philip W., Panagopoulos, Yiannis, 2017

Assessment of Bioenergy Cropping Scenarios for the Boone River Watershed in North Central Iowa, United States
Journal of the American Water Resources Association, Gassman, Philip W., Valcu-Lisman, Adriana M., Kling, Catherine L., Mickelson, Steven K., Panagopoulos, Yiannis, Cibin, Raj, Chaubey, Indrajeet, Wolter, Calvin F., Schilling, Keith E., 2017

Prevalence of Metabolic Syndrome and its Associated Factors among Multi-ethnic Adults in Rural Areas in Xinjiang, China
Scientific reports, Guo, Heng, Gao, Xiang, Ma, Rulin, Liu, Jiaming, Ding, Yusong, Zhang, Mei, Zhang, Jingyu, Mu, Lati, He, Jia, Yan, Yizhong, Ma, Jiaolong, Guo, Shuxia, Wei, Sheng, 2017

Water Quality Assessment of Large-scale Bioenergy Cropping Scenarios for the Upper Mississippi and Ohio-Tennessee River Basins
Journal of the American Water Resources Association, Panagopoulos, Yiannis, Gassman, Philip W., Kling, Catherine L., Cibin, Raj, Chaubey, Indrajeet, 2017

Structural properties of starch-chitosan-gelatin foams and the impact of gelatin on MC3T3 mouse osteoblast cell viability
Journal of Biological Engineering, Risser, Gregory E., Banik, Brittany L., Brown, Justin Lee, Catchmark, Jeffrey M., 2017

Continuous hydrologic and water quality monitoring of vernal ponds
Journal of Visualized Experiments, Mina, Odette, Gall, Heather E., Chandler, Joseph W., Harper, Jeremy, Taylor, Malcolm, 2017

Environmentally Friendly Process for Recovery of Wood Preservative from Used Copper Naphthenate-Treated Railroad Ties
ACS Sustainable Chemistry and Engineering, Haber, Holly L., Kim, Pyoungchung, Chmely, Stephen, Lloyd, Jeff, Regmi, Yagya N., Abdoulmoumine, Nourredine, Labbé, Nicole, 2017

Enhanced dispersion and interface compatibilization of crystalline nanocellulose in polylactide by surfactant adsorption
Cellulose, Chi, Kai, Catchmark, Jeffrey M., 2017

Atmospheric nitrogen loss factor (f) used in determining nitrogen-based municipal wastewater effluent irrigation rates
Nutrient Cycling in Agroecosystems, Sendagi, Stella Maris, Elliott, Herschel A., 2017

Crystalline nanocellulose/lauric arginate complexes
Carbohydrate Polymers, Chi, Kai, Catchmark, Jeffrey M., 2017

The influences of added polysaccharides on the properties of bacterial crystalline nanocellulose
Nanoscale, Chi, Kai, Catchmark, Jeffrey M., 2017

Complexity as a streamflow metric of hydrologic alteration
Stochastic Environmental Research and Risk Assessment, Jovanovic, Tijana, García, Susana, Gall, Heather, Mejía, Alfonso, 2017

Scalable and Tunable Carbide-Phosphide Composite Catalyst System for the Thermochemical Conversion of Biomass
ACS Sustainable Chemistry and Engineering, Regmi, Yagya N., Rogers, B. R., Labbé, Nicole, Chmely, Stephen C., 2017

Carbon and nitrogen environmental trade-offs of winter rye cellulosic biomass in the Chesapeake Watershed
Agricultural Systems, Ramcharan, Amanda M., Richard, Tom L., 2017

Relative role of transport and source-limited controls for estrogen, TDP, and DOC export for two manure application methods
Agriculture, Ecosystems and Environment, Mina, Odette, Gall, Heather Elise, Saporito, L. S., Elliott, Herschel Adams, Kleinman, P. J.A., 2017

Lignin-coated cellulose nanocrystal filled methacrylate composites prepared via 3D stereolithography printing: Mechanical reinforcement and thermal stabilization
Carbohydrate Polymers, Feng, Xinhao, Yang, Zhaozhe, Chmely, Stephen, Wang, Qingwen, Wang, Siqun, Xie, Yanjun, 2017

Air Quality in Norwegian Horse Stables at Low Outdoor Temperatures
Journal of Equine Veterinary Science, Bøe, Knut Egil, Dragsund, Guro, Jørgensen, Grete H.M., Fabian-Wheeler, Eileen, 2017

Integrated Economic and Environmental Assessment of Cellulosic Biofuel Production in an Agricultural Watershed
Bioenergy Research, Song, Jingyu, Gramig, Benjamin M., Cibin Raj, Fnu, Chaubey, Indrajeet, 2017

Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequences
Nucleic acids research, Borujeni, Amin Espah, Cetnar, Daniel, Farasat, Iman, Smith, Ashlee, Lundgren, Natasha, Salis, Howard M., 2017

Effect of fruit location on apple detachment with mechanical shaking
Biosystems Engineering, He, Long, Fu, Han, Karkee, Manoj, Zhang, Qin, 2017

Impact of plant matrix polysaccharides on cellulose produced by surface-tethered cellulose synthases
Carbohydrate Polymers, Basu, Snehasish, Omadjela, Okako, Zimmer, Jochen, Catchmark, Jeffrey M., 2017

Comparative analysis of HRU and grid-based SWAT models
Water (Switzerland), Pignotti, Garett, Rathjens, Hendrik, Cibin, Raj, Chaubey, Indrajeet, Crawford, Melba, 2017

Economic analysis of a low-cost apple harvest-assist unit
HortTechnology, Zhang, Zhao, Heinemann, Paul H., 2017

Electrocatalytic Activity and Stability Enhancement through Preferential Deposition of Phosphide on Carbide
ChemCatChem, Regmi, Yagya N., Roy, Asa, Goenaga, Gabriel A., McBride, James R., Rogers, Bridget R., Zawodzinski, Thomas A., Labbé, Nicole, Chmely, Stephen C., 2017

Ductility enhancement of autoclaved cellulose fiber reinforced cement boards manufactured using a laboratory method simulating the Hatschek process
Construction and Building Materials, Akhavan, Alireza, Catchmark, Jeffrey, Rajabipour, Farshad, 2017

The impact of antibiotics on bacterial cellulose in vivo
Cellulose, Henning, Alyssa L., Catchmark, Jeffrey M., 2017

Brush mechanism for distributing apples in a low-cost apple harvest-assist unit
Applied Engineering in Agriculture, Zhang, Zhao, Heinemann, Paul, Liu, Jude, Schupp, James, Baugher, Tara, 2017

Biophysical and hydrological effects of future climate change including trends in CO2, in the St. Joseph River watershed, Eastern Corn Belt
Agricultural Water Management, Wang, Ruoyu, Bowling, Laura C., Cherkauer, Keith A., Cibin, Raj, Her, Younggu, Chaubey, Indrajeet, 2017

Imaging Hydrological Processes in Headwater Riparian Seeps with Time-Lapse Electrical Resistivity
Groundwater, Williams, Mark R., Buda, Anthony R., Singha, Kamini, Folmar, Gordon J., Elliott, Herschel A., Schmidt, John P., 2017

Strain and plastic composite support (PCS) selection for vitamin K (Menaquinone-7) production in biofilm reactors
Bioprocess and Biosystems Engineering, Mahdinia, Ehsan, Demirci, Ali, Berenjian, Aydin, 2017

Simulating establishment periods of switchgrass and miscanthus in the soil and water assessment tool (SWAT)
Transactions of the ASABE, Feng, Q., Chaubey, I., Cibin Raj, Fnu, Engel, B., Sudheer, K. P., Volenec, J., 2017

A process-based model for cattle manure compost windrows: Part 2. model performance and application
Transactions of the ASABE, Bonifacio, H. F., Rotz, C. A., Richard, Thomas Lehman, 2017

Imaging ripirian seepage zones using time-lapse electrical resistivity
Groundwater, Williams, Mark, Buda, Anthony, Singha, K, Elliott, Herschel, Schmidt, J, 2017

Enzymatic extraction of pectin from passion fruit peel (Passiflora edulis f. flavicarpa) at laboratory and bench scale
LWT, Vasco-Correa, Juliana, Zapata Zapata, A, 2017

Using a chelating agent to generate low ash bioenergy feedstock
Biomass and Bioenergy, Edmunds, Charles Warren, Hamilton, Choo, Kim, Keonhee, Chmely, Stephen C., Labbé, Nicole, 2017

Operator exposure to hydrogen sulfide from dairy manure storages containing gypsum bedding
Journal of Agricultural Safety and Health, Fabian-Wheeler, E. E., Hile, M. L., Murphy, D. J., Hill, D. E., Meinen, R., Brandt, R. C., Elliott, H. A., Hofstetter, D., 2017

Evaluation of a localized shake-and-catch harvesting system for fresh market apples
Agricultural Engineering International: CIGR Journal, He, Long, Fu, Han, Xia, Hongmei, Manoj, Karkee, Zhang, Qin, Whiting, Matthew, 2017

Production and application of Menaquinone-7 (Vitamin K2): A new perspective
World Journal of Microbiology and Biotechnology, Mahdinia, Ehsan, Demirci, Ali, Berenjian, Aydin, 2017

Online CAD/CFD-based design tool to assess ventilation strategies to reduce confined-space entry risk
Chemical Engineering Transactions, Murphy, Dennis James, Manbeck, Harvey B., Hofstetter, Daniel William, Puri, Virendra, 2017

Sustainable barrier materials based on polysaccharide polyelectrolyte complexes
Green Chemistry, Basu, Snehasish, Plucinski, Adam, Catchmark, Jeffrey M., 2017

Lattice matched carbide-phosphide composites with superior electrocatalytic activity and stability
Chemistry of Materials, Regmi, Y, Roy, A, King, L, Cullen, D, Meyer, III, H, Goenaga, G, Zawodzinski, Jr, T, Labbé, N, Chmely, Stephen, 2017

Waste Audit and Evaluation of Alternative Waste Management Options at a College Football Stadium
Sustainability, Costello, Christine, Birisci, Esma, McGarvey, Ronald, 2017

Simultaneous saccharification and fermentation of ethanol from potato waste by co-cultures of Aspergillus niger and Saccharomyces cerevisiae in biofilm reactors
Fuel, Izmirlioglu, Gulten, Demirci, Ali, 2017

An assessment of farm scale biomass pelleting in the Northeast
Renewable Energy, Ciolkosz, Daniel, Jacobson, Michael, Heil, Nichole, Brandau, Will, 2017

A process-based model for cattle manure compost windrows: Part 1. model description
Transactions of the ASABE, Bonifacio, H. F., Rotz, C. A., Richard, T. L., 2017

Biomass treatment strategies for thermochemical conversion
Energy & Fuels, Liu, Q, Chmely, Stephen, Abdoulmoumine, N, 2017

Beneficial effects of Trametes versicolor pretreatment on saccharification and lignin enrichment of organosolv-pretreated pinewood
RSC Advances, Kandhola, G, Rajan, K, Labbé, N, Chmely, Stephen, Heringer, N, Kim, J-W, Hood, E, Carrier, D, 2017

Marginal land suitability for switchgrass, Miscanthus and hybrid poplar in the Upper Mississippi River Basin (UMRB)
Environmental Modelling and Software, Feng, Qingyu, Chaubey, Indrajeet, Engel, Bernard, Cibin Raj, Fnu, Sudheer, K. P., Volenec, Jeffrey, 2017

Improved simultaneous saccharification and fermentation of bioethanol from industrial potato waste with co-cultures of Aspergillus niger and Saccharomyces cerevisiae by medium optimization
Fuel, Izmirlioglu, Gulten, Demirci, Ali, 2016

Impact of long-term wastewater irrigation on the physicochemical properties of humid region soils: “The Living Filter” site case study
Agricultural Water Management, Andrews, D. M., Robb, T., Elliott, H., Watson, J. E., 2016

Natural and anthropogenic controls on the frequency of preferential flow occurrence in a wastewater spray irrigation field
Agricultural Water Management, Hopkins, Isaac, Gall, Heather, Lin, Henry, 2016

Recent advances for production and recovery methods of lysozyme
Critical Reviews in Biotechnology, Ercan, Duygu, Demirci, Ali, 2016

Effect of cellulose crystallinity on bacterial cellulose assembly
Cellulose, Ruan, Changshun, Zhu, Yongjun, Zhou, Xin, Abidi, Noureddine, Hu, Yang, Catchmark, Jeffrey M., 2016

Development and validation of a Weibull–Arrhenius model to predict thermal inactivation of black mustard (Brassica nigra) seeds under fluctuating temperature regimens
Biosystems Engineering, Dahlquist-Willard, Ruth M., Marshall, Megan N., Betts, Stacy L., Tuell-Todd, Carrie C., VanderGheynst, Jean S., Stapleton, James J., 2016

Single particle mechanical characterization of ground switchgrass in air dry and wet states using a microextensometer
Powder Technology, Karamchandani, Apoorva, Yi, Hojae, Puri, Virendra M., 2016

Effect of media sterilization and enrichment on ethanol production from carob extract in a biofilm reactor
Energy Sources, Part A: Recovery, Utilization and Environmental Effects, Germec, Mustafa, Turhan, Irfan, Demirci, Ali, Karhan, Mustafa, 2016

Robust Optimization Evaluation of Reliance on Locally Produced Foods
Environment Systems and Decisions, Dundar, Bayram, Costello, Christine, McGarvey, Ronald, 2016

Ethanol production in biofilm reactors from potato waste hydrolysate and optimization of growth parameters for Saccharomyces cerevisiae
Fuel, Izmirlioglu, Gulten, Demirci, Ali, 2016

Imaging Hydrological Processes in Headwater Riparian Seeps with Time-Lapse Electrical Resistivity.
Ground water, Williams, Mary Elizabeth, Buda, A, Singha, Kamini, Folmar, G, Elliott, Herschel, Schmidt, J, 2016

Detection of dropped citrus fruit on the ground and evaluation of decay stages in varying illumination conditions
Computers and Electronics in Agriculture, Choi, D., Lee, W. S., Ehsani, R., Schueller, J., Roka, F. M., 2016

Champions, Converts, Doubters, and Defectors
Personnel Psychology, Jansen, Karen J., Shipp, Abbie J., Michael, Judd H., 2016

Investigating biochemical and developmental dependencies of lignification with a click-compatible monolignol analog in arabidopsis thaliana stems
Frontiers in Plant Science, Pandey, Jyotsna L., Kiemle, Sarah N., Richard, Tom L., Zhu, Yimin, Cosgrove, Daniel J., Anderson, Charles T., 2016

Temperature-dependent dynamic moduli of Parylene-C columnar microfibrous thin films
Polymer Testing, Chindam, Chandraprakash, Brown, Nicole R., Lakhtakia, Akhlesh, Awadelkarim, Osama O., Orfali, Wasim, 2016

Orchard worker localisation relative to a vehicle using radio ranging and trilateration
Biosystems Engineering, Vougioukas, Stavros G., He, Long, Arikapudi, Rajkishan, 2016

Watershed-scale impacts of bioenergy crops on hydrology and water quality using improved SWAT model
GCB Bioenergy, Cibin Raj, Fnu, Trybula, Elizabeth, Chaubey, Indrajeet, Brouder, Sylvie M., Volenec, Jeffrey J., 2016

Anthracite briquettes with plant byproducts as an ecofriendly fuel for foundries
Fuel, Noh, Young Dong, Komarneni, Sridhar, Cannon, Fred Scott, Brown, Nicole, Katsuki, Hiroaki, 2016

Mechanical and structural property analysis of bacterial cellulose composites
Carbohydrate Polymers, Dayal, Manmeet Singh, Catchmark, Jeffrey M., 2016

Translation Initiation is Controlled by RNA Folding Kinetics via a Ribosome Drafting Mechanism
Journal of the American Chemical Society, Espah Borujeni, Amin, Salis, Howard M., 2016

Strain selection and medium optimization for glucoamylase production from industrial potato waste by Aspergillus niger
Journal of the science of food and agriculture, Izmirlioglu, Gulten, Demirci, Ali, 2016

Review
International Journal of Greenhouse Gas Control, Carroll, Susan, Carey, J. William, Dzombak, David, Huerta, Nicolas J., Li, Li, Richard, Thomas Lehman, Um, Wooyong, Walsh, Stuart D.C., Zhang, Liwei, 2016

Optimal selection and placement of BMPs and LID practices with a rainfall-runoff model
Environmental Modelling and Software, Liu, Yaoze, Cibin Raj, Fnu, Bralts, Vincent F., Chaubey, Indrajeet, Bowling, Laura C., Engel, Bernard A., 2016

Assessment of plant availability and environmental risk of biosolids-phosphorus in a U.S. Midwest Corn-Belt Soil
Journal of Environmental Management, Tian, G., Cox, A. E., Kumar, K., Granato, T. C., O'Connor, G. A., Elliott, Herschel Adams, 2016

Screening of Mixed-Metal Oxide Species for Catalytic Ex Situ Vapor-Phase Deoxygenation of Cellulose by py-GC/MS Coupled with Multivariate Analysis
Energy and Fuels, Kim, Pyoungchung, Rials, Timothy G., Labbé, Nicole, Chmely, Stephen, 2016

Disinfection of synthetic and real municipal wastewater effluent by flow-through pulsed UV-light treatment system
Journal of Water Process Engineering, Uslu, Gulsad, Demirci, Ali, Regan, John M., 2016

Predictions in ungauged basins
Stochastic Environmental Research and Risk Assessment, Athira, P., Sudheer, K. P., Cibin, R., Chaubey, I., 2016

Effect of urbanization on the long-term persistence of streamflow records
Physica A: Statistical Mechanics and its Applications, Jovanovic, Tijana, Mejia, Alfonso Ignacio, Gall, Heather Elise, Gironás, Jorge, 2016

Analysis of shaking-induced cherry fruit motion and damage
Biosystems Engineering, Zhou, Jianfeng, He, Long, Karkee, Manoj, Zhang, Qin, 2016

Enhanced phenylpyruvic acid production with Proteus vulgaris by optimizing of the fermentation medium
Acta Alimentaria, Coban, H. B., Demirci, A., Patterson, P. H., Elias, R. J., 2016

Ultrasound-assisted dilute acid hydrolysis of tea processing waste for production of fermentable sugar
Biotechnology progress, Germec, Mustafa, Tarhan, Kübra, Yatmaz, Ercan, Tetik, Nedim, Karhan, Mustafa, Demirci, Ali, Turhan, Irfan, 2016

Cellulose microfibril formation by surface-tethered cellulose synthase enzymes
ACS Nano, Basu, Snehasish, Omadjela, Okako, Gaddes, David, Tadigadapa, Srinivas A., Zimmer, Jochen, Catchmark, Jeffrey M., 2016

Bioabsorbable cellulose composites prepared by an improved mineral-binding process for bone defect repair
Journal of Materials Chemistry B, Hu, Yang, Zhu, Yongjun, Zhou, Xin, Ruan, Changshun, Pan, Haobo, Catchmark, Jeffrey M., 2016

Enhanced phenylpyruvic acid production with Proteus vulgaris in fed-batch and continuous fermentation
Preparative Biochemistry and Biotechnology, Coban, Hasan B., Demirci, Ali, Patterson, Paul H., Elias, Ryan, 2016

Three-dimensional manipulation of single cells using surface acoustic waves
Proceedings of the National Academy of Sciences of the United States of America, Guo, Feng, Mao, Zhangming, Chen, Yuchao, Xie, Zhiwei, Lata, James P., Li, Peng, Ren, Liqiang, Liu, Jiayang, Yang, Jian, Dao, Ming, Suresh, Subra, Huang, Tony Jun, 2016

A string twining robot for high trellis hop production
Computers and Electronics in Agriculture, He, Long, Zhou, Jianfeng, Zhang, Qin, Charvet, Henry J., 2016

Enhancement and modeling of microparticle-added Rhizopus oryzae lactic acid production
Bioprocess and biosystems engineering, Coban, Hasan Bugra, Demirci, Ali, 2016

Effect of catching surface and tilt angle on bruise damage of sweet cherry due to mechanical impact
Computers and Electronics in Agriculture, Zhou, Jianfeng, He, Long, Karkee, Manoj, Zhang, Qin, 2016

Automated physics-based design of synthetic riboswitches from diverse RNA aptamers
Nucleic acids research, Espah Borujeni, Amin, Mishler, Dennis M., Wang, Jingzhi, Huso, Walker, Salis, Howard M., 2016

Effect of Fruit Location on Apple Detachment with Mechanical Shaking
IFAC-PapersOnLine, He, Long, Fu, Han, Karkee, Manoj, Zhang, Qin, 2016

Estrogen transport in surface runoff from agricultural fields treated with two application methods of dairy manure
Journal of Environmental Quality, Mina, Odette, Gall, Heather E., Saporito, Louis S., Peter, Kleinman A., 2016

A Biophysical Model of CRISPR/Cas9 Activity for Rational Design of Genome Editing and Gene Regulation
PLoS Computational Biology, Farasat, Iman, Salis, Howard, 2016

Design and Evaluation of a Levelling System for a Weeding Robot
IFAC-PapersOnLine, Chen, Lin, Kaewkorn, Supod, He, Long, Zhang, Qin, Karkee, Manoj, 2016

Fungal pretreatment of non-sterile miscanthus for enhanced enzymatic hydrolysis
Bioresource Technology, Vasco-Correa, Juliana, Ge, X, Li, Y, 2016

Giant reed: A competitive energy crop in comparison with miscanthus
Renewable and Sustainable Energy Reviews, Ge, X, Xu, F, Vasco-Correa, Juliana, Li, Y, 2016

Dynamics Analysis on Piezoelectric Laminated Vibrator and Optimization of PZT Position
Shock and Vibration, Hu, Caiqi, Hu, Xiaoqi, Ji, Jing, Liu, Jude, Li, Shengduo, 2016

Assessing the impacts of anthropogenic and hydro-climatic drivers on estrogen legacies and trajectories
Advances in Water Resources, Gall, Heather E., Basu, Nandita B., Mashtare, Michael L., C. Rao, P. Suresh, Lee, Linda S., 2016

Steering Control Strategies for a Four-Wheel-Independent-Steering Bin Managing Robot
IFAC-PapersOnLine, Ye, Yunxiang, He, Long, Zhang, Qin, 2016

Effects of feeding encapsulated nitrate to beef cattle on ammonia and greenhouse gas emissions from their manure in a short-term manure storage system
Journal of Environmental Quality, Lee, Chanhee, Araujo, Rafael C., Koenig, Karen M., Hile, Michael L., Fabian-Wheeler, Eileen E., Beauchemin, Karen A.Beauchemin, 2016

Bruise Responses of Apple-to-Apple Impact
IFAC-PapersOnLine, Fu, Han, He, Long, Ma, Shaochun, Karkee, Manoj, Chen, Du, Zhang, Qin, Wang, Shumao, 2016

Iron piano-stool complexes containing NHC ligands outfitted with pendent arms
RSC Advances, Das, Parthapratim, Elder, Thomas, Brennessel, William W., Chmely, Stephen C., 2016

Design and field test of a low-cost apple harvest-assist unit
Transactions of the ASABE, Zhang, Z., Heinemann, P. H., Liu, J., Schupp, J. R., Baugher, T. A., 2016

Ethanol production via repeated-batch fermentation from carob pod extract by using Saccharomyces cerevisiae in biofilm reactor
Fuel, Germec, Mustafa, Turhan, Irfan, Karhan, Mustafa, Demirci, Ali, 2015

Effects of fed-batch and continuous fermentations on human lysozyme production by Kluyveromyces lactis K7 in biofilm reactors
Bioprocess and biosystems engineering, Ercan, Duygu, Demirci, Ali, 2015

Improved submerged Aspergillus ficuum phytase production in bench-top bioreactors by optimization of fermentation medium
Acta Alimentaria, Coban, H. B., Demirci, A., 2015

Perennial rhizomatous grasses as bioenergy feedstock in SWAT
GCB Bioenergy, Trybula, Elizabeth M., Cibin Raj, Fnu, Burks, Jennifer L., Chaubey, Indrajeet, Brouder, Sylvie M., Volenec, Jeffrey J., 2015

The energy saving factor research of secondary regulation system of cement coating machine
ICIC Express Letters, Part B: Applications, Kong, Xiangdong, Luo, Hongliang, Ai, Chao, He, Long, Dong, Yanwu, 2015

The mechanical properties of plant cell walls soft material at the subcellular scale
Journal of Materials Science, Zamil, M. Shafayet, Yi, Hojae, Puri, Virendra M., 2015

Enhanced bio-ethanol production from industrial potato waste by statistical medium optimization
International journal of molecular sciences, Izmirlioglu, Gulten, Demirci, Ali, 2015

Hydrologic and water quality impacts and biomass production potential on marginal land
Environmental Modelling and Software, Feng, Qingyu, Chaubey, Indrajeet, Her, Young Gu, Cibin, Raj, Engel, Bernard, Volenec, Jeffrey, Wang, Xiuying, 2015

Fundamental mechanical properties of ground switchgrass for quality assessment of pellets
Powder Technology, Karamchandani, Apoorva, Yi, Hojae, Puri, Virendra, 2015

Integrated acidogenic digestion and carboxylic acid separation by nanofiltration membranes for the lignocellulosic carboxylate platform
Journal of Membrane Science, Xiong, Boya, Richard, Tom L., Kumar, Manish, 2015

Evaluation of multipass mechanical harvesting on ‘skeena’ sweet cherries trained to Y-trellis
HortScience, He, Long, Zhou, Jianfeng, Zhang, Qin, Karkee, Manoj, 2015

Enhanced Aspergillus ficuum phytase production in fed-batch and continuous fermentations in the presence of talcum microparticles
Bioprocess and Biosystems Engineering, Coban, Hasan B., Demirci, Ali, Turhan, Irfan, 2015

Influence of Riparian Seepage Zones on Nitrate Variability in Two Agricultural Headwater Streams
Journal of the American Water Resources Association, Williams, Mark R., Buda, Anthony R., Elliott, Herschel A., Singha, Kamini, Hamlett, James, 2015

Cellulose produced by Gluconacetobacter xylinus strains ATCC 53524 and ATCC 23768
Carbohydrate Polymers, Lee, Christopher M., Gu, Jin, Kafle, Kabindra, Catchmark, Jeffrey, Kim, Seong H., 2015

A portable expression resource for engineering cross-species genetic circuits and pathways
Nature communications, Kushwaha, Manish, Salis, Howard M., 2015

Enhanced human lysozyme production by Kluyveromyces lactis K7 in biofilm reactor coupled with online recovery system
Biochemical Engineering Journal, Ercan, Duygu, Demirci, Ali, 2015

Microparticle-enhanced Aspergillus ficuum phytase production and evaluation of fungal morphology in submerged fermentation
Bioprocess and Biosystems Engineering, Coban, Hasan B., Demirci, Ali, Turhan, Irfan, 2015

Rational design of a synthetic Entner-Doudoroff pathway for improved and controllable NADPH regeneration
Metabolic engineering, Ng, Chiam Yu, Farasat, Iman, Maranas, Costas D., Salis, Howard M., 2015

Mathematical modeling and cycle time reduction of deposit removal from stainless steel pipeline during cleaning-in-place of milking system with electrolyzed oxidizing water
Journal of Food Engineering, Wang, Xinmiao, Puri, Virendra, Demirci, Ali, Graves, Robert E., 2015

Comparison of export dynamics of nutrients and animal-borne estrogens from a tile-drained Midwestern agroecosystem
Water Research, Gall, Heather E., Sassman, Stephen A., Jenkinson, Byron, Lee, Linda S., Jafvert, Chad T., 2015

A computationally efficient approach for watershed scale spatial optimization
Environmental Modelling and Software, Cibin, R., Chaubey, I., 2015

Isolation and characterization of two cellulose morphology mutants of Gluconacetobacter hansenii ATCC23769 producing cellulose with lower crystallinity
PloS one, Deng, Ying, Nagachar, Nivedita, Fang, Lin, Luan, Xin, Catchmark, Jeffrey M., Tien, Ming, Kao, Teh-hui, 2015

Effects of forage-to-concentrate ratio and dietary fiber manipulation on gas emissions and olfactometry from manure of Holstein heifers
Journal of dairy science, Lascano, G. J., Heinrichs, Arlyn Judson, Gary, R. R., Topper, P. A., Brandt, R. C., Adviento-Borbe, A., Fabian, Eileen, 2015

Case study
Professional Animal Scientist, Hristov, Alexander Nikolov, Heyler, K., Schurman, E., Griswold, K., Topper, P., Hile, M., Ishler, V., Fabian, Eileen, Dinh, S., 2015

Characterization of cellulose and other exopolysaccharides produced from Gluconacetobacter strains
Carbohydrate Polymers, Fang, Lin, Catchmark, Jeffrey M., 2015

Multiscale stress–strain characterization of onion outer epidermal tissue in wet and dry states
American Journal of Botany, Kim, Keekyoung, Yi, Hojae, Shafayet Zamil, M., Haque, Md, Puri, Virendra, 2015

A predictive biophysical model of translationalcoupling to coordinate and control protein expressionin bacterial operons
Nucleic acids research, Tian, Tian, Salis, Howard M., 2015

Analysis of flow field and pumping performance for a valveless piezoelectric pump with a hemisphere-segment group
Strojniski Vestnik/Journal of Mechanical Engineering, Hu, Caiqi, Ji, Jing, Hu, Xiaoqi, Liu, Jude, Li, Shengduo, 2015

Solid-state anaerobic digestion of fungal pretreated Miscanthus sinensis harvested in two different seasons
Bioresource Technology, Vasco-Correa, Juliana, Li, Y, 2015

Fungal pretreatment for non-sterile Miscanthus × giganteus for enhanced sugar yield in enzymatic hydrolysis
2015 ASABE Annual International Meeting Conference Proceeding, Vasco-Correa, Juliana, Ge, X, Li, Y, 2015

Energy and greenhouse gas analysis of northeast U.S. dairy cropping systems
Agriculture, Ecosystems and Environment, Malcolm, G. M., Camargo, G. G.T., Ishler, V. A., Richard, Thomas Lehman, Karsten, Heather D., 2015

Application of parallel computing methods for improving efficiency of optimization in hydrologic and water quality modeling
Applied Engineering in Agriculture, Her, Younggu, Cibin Raj, Fnu, Chaubey, Indrajeet, 2015

Linking nitrogen management, seep chemistry, and stream water quality in two agricultural headwater watersheds
Journal of Environmental Quality, Williams, Mark R., Buda, Anthony R., Elliott, Herschel A., Collick, Amy S., Dell, Curtis, Kleinman, Peter J.A., 2015

Development of a selective automated blossom thinning system for peaches
Transactions of the ASABE, Lyons, David, Heinemann, Paul Heinz, Schupp, James Rawlinson, Baugher, T. A., Liu, Jude, 2015

Farm-Scale biomass pelletizer performance for switchgrass pellet production
Applied Engineering in Agriculture, Ciolkosz, Daniel Edward, Hilton, R., Swackhamer, C., Yi, Hojae, Puri, Virendra, Swomley, D., Roth, Gregory Wayne, 2015

A machine vision system for quantification of citrus fruit dropped on the ground under the canopy
Transactions of the ASABE, Choi, Daeun, Lee, Won Suk, Ehsani, Reza, Roka, Fritz M., 2015

Vegetative buffer and fly ash pad surface material system application for reducing runoff, sediment and nutrient losses from livestock manure windrow composting facilities
International Journal of Energy, Environment and Economics, Webber, David, Mickelson, S. K., Richard, T. L., Ahn, H. K., 2015

Enhanced phenylpyruvic acid production with Proteus vulgaris in fed-batch and continuous fermentation
Preparative Biochemistry and Biotechnology, Coban, H, Demirci, Ali, Patterson, Paul, Elias, Ryan, 2015